Cho Hatsumei Boy Kanipan is a continued story from Hatsumei Boy Kanipan. Kanipan is now a teenager, and still a famous inventor. But one day, a mysterious ship fell from the sky and crashed at a beach. Inside was a female humanoid that has forgotten all about herself. It is up to Kanipan to revive the humanoid's memory, and he accidentally discover that his planet is in great danger as he strived. (Source: ANN)

The story revolves around Kanipan aiming to be the best inventor and his adventures while trying to accomplish this.